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The people involved: Jens Dreyer
Former team members:
International collaboration: Shaul Mukamel,
Department of Chemistry, University of Rochester, Rochester,
NY, USA
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Research topics | |
1.
Ab initio simulation of coherent three-pulse spectroscopies The
molecular structure forms the basis for understanding and predicting chemical,
physical and biological properties. Multidimensional femtosecond vibrational spectroscopy
is a novel tool with great promise for determining the dynamics of molecular structures
such as proteins or hydrogen-bonded systems on ultrafast time scales that are
hardly accessed by NMR or X-ray spectroscopy (see Multidimensional Femtosecond
Correlation Spectroscopies of Electronic and Vibrational Excitations S. Mukamel
Ann. Rev. Phys. Chem. 2000, 51, 691-729). Multidimensional
infrared spectroscopy constitutes a three-pulse (four-wave
mixing) third-order nonlinear technique that is based on the manipulation
and control of multiple quantum coherences to probe coupled vibrational modes.
Multidimensional (nD) correlation plots
result by displaying the signal with respect to n variables. These may
include time intervals between pulses, carrier frequencies, or other pulse parameters
like envelopes, polarizations, durations, and even phases. Advantages of multidimensional
spectroscopy are: - Congested ordinary one-dimensional spectra may be
disentangled by spreading the signal into additional dimensions, allowing the
time scales of environmental bath interactions to be discerned by lineshape analysis.
-
Newly appearing cross peaks in two-dimensional correlation plots contain direct
signatures of intra- or intermolecular interactions that can be converted into
structural and dynamical information.
- Intense tunable 50-100 fs infrared
pulses make it possible to monitor structural changes and ultrafast processes
such as vibrational energy relaxation and redistribution, charge transfer, conformational
fluctuations, and chemical reactions.
- Properties of potential energy
surfaces like diagonal and off-diagonal anharmonicities are measured directly.
To
analyze multidimensional spectra and to design new experiments theoretical simulations
are necessary. The aim of this project is to develep a new methodology which allows
to predict multidimensional spectra from first principles. To this end, quantum
chemical calculations, e.g. Hartree-Fock or density functional theory, are combined
with the simulation of nonlinear response functions. We generate an anharmonic
force-field up to fourth-order as well as dipole derivatives to second order for
a number of selected local oscillators represented by internal coordinates. Higher-order
force constants are calculated by numerical differentiation of second-order (harmonic)
force constants. An anharmonic vibrational Hamiltonian is then generated and diagonalized.
The representation of the dipole is then transformed into the eigenstate basis,
resulting in transition dipole moments between all the eigenstates. Those together
with the eigenstate energies are used to calculate nonlinear coherent signals
applying the sum over states approach. | 
Different coherent four-wave mixing techniques are classified
by constructing all possible wavevector combinations of the three incoming pulses,
which leads to four distinct signal directions that can be measured independently.
2D spectra of multilevel vibrational systems contain a large number of peaks that
are likely to overlap. In particular, the usually intense diagonal peaks often
obscure the desired cross peaks which carry more detailed structural signatures.
We therefore investigate two methods that can be used to simplify the spectra:
The superposition of single wavevector spectra, and the use of specific polarization
configurations to select desired combinations of tensor components. Both procedures
can be applied to control or remove certain groups of peaks from the spectra,
that is diagonal peaks, cross peaks or overtone peaks. Initial
studies were performed on small molecules, a rhodium-dicarbonyl complex, where
extensive experimental data are available for comparison, and a rigid bycyclic
dipeptide. |
| | Four distinct signal
contributions that can be measured independently. |
kI
= - k1 + k2 + k3
kII
= + k1 - k2 + k3 
kIII
= + k1 + k2 - k3 
kIV
= + k1 + k2 + k3 
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| | 
We
simulated one- and two-color 2D vibrational spectra, either with all three pulses
in resonance with the symmetric and antisymmetric
C=O stretching bands (see Figure for a typical photon echo 2D spectrum) or with
two resonant with the C=O bands and one tuned to the symmetric
and antisymmetric N-H stretching transitions. The
one-color experiments reveal information on the coupling of amide I modes, which
can be used to monitor the secondary structure of peptides and proteins and follow
its fluctuations on ultrafast time scales. The two-color experiments yield the
coupling of peptide C=O and N--H bonds, which provides additional insight into
structural and dynamical properties. | | | 2.
Ab initio simulation of linear and nonlinear spectra of acetic acid dimers Carboxylic
acids are important model systems displaying key features of hydrogen-bonded systems
in nature. They represent a structural motif of cooperative hydrogen bonds in
proteins containing aspartic or glutamic acid and mimic multiple hydrogen bonds
in acid base pairs. Acetic acid predominantly forms cyclic C2h-symmetric dimers
with two hydrogen bonds in the gas phase as well as in nonpolar solution.
| | | Vibrational spectra
provide information about local properties of hydrogen bonded groups. The lineshapes
of the high-frequency O-H stretching mode of
OH groups involved in the hydrogen bonds are often very complex and highly congested
reflecting the complicated underlying microscopic interactions, and consequently,
the dynamics and line broadening mechanisms of hydrogen bonds. Only recently
high-resolution infrared (IR) spectra of acetic acid dimer became available from
supersonic jet Fourier transform spectroscopy measured in the group of Martin
Suhm. These cold gas phase spectra uncover much of the vibrational fine structure
and can thus serve as a reference for zero temperature gas phase calculations
to analyze the O-H stretching mode IR spectra.
| | | To reach a quantitative
understanding of the spectra we performed density functional theory calculations
of the linear O-H stretching mode IR spectra
taking the following spectral broadening mechanisms into account: (1)
anharmonic coupling between the high-frequency O-H stretching vibration and low-frequency
modes, (2) Fermi resonance coupling between the v=1 state of
the O-H stretching mode and combination tones
of fingerprint modes, and (3) a combination of (1) and (2).
From a comparison of calculated and experimental spectra one can conclude that
only the combined mechanism accounts for the full spectral width and substructure.
We identify 2 Raman active low-frequency modes, the in-plane
bending and stretching inter-dimer
hydrogen bond modes, and combination states of the C-O stretching,
out-of-plane methyl group deformation,
in-plane O-H deformation and the C=O stretching IR
and Raman active modes to explain the lineshape of the O-H
stretching IR absorption spectram in (CH3-COOH)2. The same conclusion holds
for the spectrum of (CD3-COOH)2, except that combination bands of the methyl group
deformation mode are missing. Only a few peaks of minor intensity observed in
the gas phase IR spectrum are not accounted for by the present calculations. Thus,
it is demonstrated that both anharmonic coupling to low-frequency modes as well
as Fermi resonance coupling with fingerprint modes are essential mechanisms underlying
the lineshape of the O-H stretching IR absorption
band in acetic acid dimers.
| | | These studies were
extended to simulations of the 2D IR spectra to investigate the multidimensional
signatures of the respective coupling mechanisms. Coherent 2D IR spectra were
predicted for all 3 coupling mechanisms (homogeneous line width = 1 cm-1, vibrational
temperature 0 K). Spectra including the R3 diagram only resemble conditions, where
the excited vibrational state has decayed already. a. Anharmonic
coupling
b. Fermi resonance coupling to fingerprint combination modes
c. Combined mechanism
In going from anharmonic coupling of the O-H stretching mode to low-frequency
modes (3 modes) to Fermi resonance coupling with fingerprint mode combination
tones (9 modes) to a combined mechanism (11 modes) the number of individual 2D
peaks grows considerably and the complexity of the vibrational signatures increases
substantially. | | | Introduction
of homogeneous broadening (36 cm-1) causes many individual peaks to overlap to
a single vibrational feature. This spectrum, calculated for ground state absorption
only (R3 feynman pathways), may be compared to the experimental 2D IR spectrum
measured at a population relaxation time of T=400 fs, at which the excited vibration
state of the O-H stretching mode has decayed already. Thus, the spectra contain
only diagonal and cross peaks. The most striking diagonal and cross peaks are
observed for the most intense bands in the linear spectrum. From the good agreement
with experimental results it is concluded that Fermi resonances dominate the T=400
fs experimental 2D spectrum. Low-frequency progressions make a minor contribution
to the 2D spectra because of their substantially smaller transition dipoles. 
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Publications on ab initio simulations of linear
and nonlinear spectra
of acetic acid dimers
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D05b
C1-P-2004.21 | J. Dreyer |
| Hydrogen-bonded
acetic acid dimers: Anharmonic coupling and linear infrared spectra studied with
density functional theory | |
J. Chem. Phys. 122 (2005) 184306/1-10 | | Download
PDF/PS-File or URL: C1-P-2004.21 |
| | D05a
C1-P-2004.22 | J. Dreyer |
| Density
functional theory simulations of two-dimensional infrared spectra for hydrogen-bonded
acetic acid dimers | | Int.
J. Quant. Chem. 104 (2005) 782-193 | | Download
PDF/PS-File or URL: C1-P-2004.22 |
| | NBC05
C1-P-2004.17 | N. Huse, B. D. Bruner,
M. L. Cowan, J. Dreyer, E. T. J. Nibbering, R. J. D. Miller, T. Elsaesser |
| Anharmonic
couplings underlying the ultrafast vibrational dynamics of hydrogen bonds in liquids |
| Phys.
Rev. Lett. 95 (2005) 147402/1-4 | | Download
PDF/PS-File or URL: C1-P-2004.17 |
| | HBC05
C1-P-2004.12 | N. Huse, B. D. Bruner,
M. L. Cowan, J. Dreyer, E. T. J. Nibbering, T. Elsaesser, R. J. D. Miller |
| Heterodyne
2D-IR photon echo spectroscopy of multi-level OH stretching coherences in hydrogen
bonds | | in:
Ultrafast Phenomena XIV, T. Kobayashi, T. Okada, T. Kobayashi, K. A. Nelson, S.
D. Silvestri eds. (Springer Verlag Berlin 2005) pp. 407-409 | | | Download
PDF/PS-File or URL: C1-P-2004.12 | |
HHD04
C1-P-2004.2 | K. Heyne, N. Huse,
J. Dreyer, E. T. J. Nibbering, T. Elsaesser, S. Mukamel | | Coherent
low-frequency motions of hydrogen bonded acetic acid dimers in the liquid phase |
| J.
Chem. Phys. 121 (2004) 902-913 | | Download
PDF/PS-File or URL: C1-P-2004.2 |
| | HHD03
C1-P-2002.17 | N. Huse, K. Heyne, J. Dreyer, E. T.
J. Nibbering, T. Elsaesser | | Vibrational
multi-level quantum coherence due to anharmonic couplings in intermolecular hydrogen
bonds | | Phys.
Rev. Lett. 91 (2003) 197401/1-4 | | Download
PDF/PS-File or URL: C1-P-2002.17 |
| | | | |
Publications on ab initio simulations of nonlinear response
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DMMb03
C1-P-2003.03 | J. Dreyer, A. M.
Moran and S. Mukamel | | Tensor
components in three pulse vibrational echoes of a rigid dipeptide |
| Bull. Korean Chem.
Soc. 24 (2003) 1091-6 | | Download
PDF/PS-File or URL: C1-P-2003.03 |
| | DMM03a
C1-P-2003.01 | J. Dreyer, A. M. Moran
and S. Mukamel | | Coherent
three-pulse spectroscopy of coupled vibrations in a rigid dipeptide: Density functional
theory simulations | | J.
Phys. Chem. B 107 (2003) 5967-5985 | | Download
PDF/PS-File or URL: C1-P-2003.01 |
| | MDM03b
C1-P-2002.20 | A. A. Moran, S.-M.
Park, J. Dreyer and S. Mukamel | | Linear
and nonlinear infrared signatures of local ?- and 310-helical structures in alanine
polypeptides | | J.
Chem. Phys 118 (2003) 3651-3659 | | Download
PDF/PS-File or URL: C1-P-2002.20 |
| | MDM03a
C1-P-2002.19 | A. A. Moran, J. Dreyer
and S. Mukamel | | Ab
initio simulation of the two-dimensional vibrational spectrum of dicarbonylacetylacetonato
rhodium(I) | | J.
Chem. Phys 118 (2003) 1347-1355 | | Download
PDF/PS-File or URL: C1-P-2002.19 |
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Publications on excited-state
structures and intramolecular charge transfer
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NDr01
C1-P-2000.13 | E. T. J. Nibbering and
J. Dreyer | | Femtosecond
chemical events of intramolecular charge transfer and intermolecular hydrogen
bond breaking after electronic excitation: structural dynamics in the condensed
phase | | in
Femtochemistry, F. C. de Schryver, S. de Feyter, and G. Schweitzer, Eds.,
(Wiley-VCH, Weinheim, Germany, 2001) pp. 345-66 | | |
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DKu00
C1-P-2000.01 | A.
Kummrow, J. Dreyer, C. Chudoba, J. Stenger, E. T. J. Nibbering and T. Elsaesser |
| Ultrafast
charge transfer studied by femtosecond IR-spectroscopy and ab initio calculations |
| J. Chin. Chem. Soc.
47 (2000), 721-728 | | Download
PDF/PS-File or URL: C1-P-2000.01 |
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DKu00
C1-P-1999.07 | J. Dreyer and A. Kummrow |
| Shedding light on
excited state structures by theoretical analysis of femtosecond transient infrared
spectra: Intramolecular charge transfer in 4-(dimethylamino) benzonitrile |
| J. Am. Chem. Soc. 122
(2000) 2577-2585 | | Download
PDF/PS-File or URL: C1-P-1999.07 |
| | CKD99
C1-P-1999.02 | C. Chudoba, A. Kummrow,
J. Dreyer, J. Stenger, E. T. J. Nibbering, T. Elsaesser and K. Zachariasse |
| Excited state structure
of 4-dimethylamino-benzonitrile studied by femtosecond mid-infrared spectroscopy
and ab-initio calculations | | Chem.
Phys. Lett. 309 (1999) 357-363 | | Download
PDF/PS-File or URL: C1-P-1999.02 |
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